Phosr package
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Phosr package
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WebFeb 23, 2024 · Here, we developed a phosphoproteomic analysis pipeline called PhosR ( Figure 1A) to address key issues in processing and downstream analysis of large-scale … WebFeb 6, 2024 · Implements the 'RUV' (Remove Unwanted Variation) algorithms. These algorithms attempt to adjust for systematic errors of unknown origin in high-dimensional data. The algorithms were originally developed for use with genomic data, especially microarray data, but may be useful with other types of high-dimensional data as well. …
WebFeb 6, 2024 · A range of tools for social network analysis, including node and graph-level indices, structural distance and covariance methods, structural equivalence detection, network regression, random graph generation, and 2D/3D network visualization. WebNov 8, 2024 · PhosR / ptImpute: Paired-tail (pt) based impute ptImpute: Paired-tail (pt) based impute In PhosR: A set of methods and tools for comprehensive analysis of phosphoproteomics data Description Usage Arguments Value Examples View source: R/Impute.R Description
WebQuickly get estimated shipping quotes for our global package delivery services. Provide the origin, destination, and weight of your shipment to compare service details then sort your … WebDescription `directPA' is a package designed to identify combinatorial effects of multiple treatments and/or perturbations on pathways and kinases profiled by microarray, RNA-seq, proteomics, or phosphoproteomics data. Download and install The relsease version can be downloaded from CRAN link;
WebThis dataset is included in the package PhosR. We can load this example dataset into current working environment as data (phosphoESC). 3.2 2D signalling pathway analysis using directPA One key aspect in studying signalling pathways is to identify key kinases that are involved in signalling cascades.
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